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Best Nonprofit Accounting Software in 2026

Nonprofit accounting software helps organizations keep track of budgets, grants, and funds with different restrictions. Compared on fund accounting, restricted-fund tracking, and grant tracking, the entries show capabilities to weigh against your financial workflows. Audit trails and financial reports offer further points of comparison for oversight, while budgeting may matter for planning. Free-plan availability…

25 appsSorted 25 Oct 2026How we rank
18.2

MoneyMinder is a web-based bookkeeping and budgeting tool for organizations managing funds, budgets, and financial reports.

Free planAndroidiOSWeb
From $25 a year
27.8
Grain Ledger logo

Grain Ledger is cloud-based accounting software for churches, built around double-entry fund accounting.

Free planAndroidWebAPI
From $50 a month
37.6
Tangicloud Fundamentals logo

Tangicloud Fundamentals adds fund and grant accounting features to Microsoft Dynamics 365 Business Central for nonprofit and government organizations.

AndroidiOSWeb
From $180 a year
  1. 4Church Windows logo

    Church Windows

    Church Windows provides church management modules for membership, scheduling, donations, accounting and payroll.

    WebmacOSSelf-hostedWindows
    7.4From $205 a year
  2. 5LineLedger logo

    LineLedger

    Free planOpen sourceWebAPILinuxSelf-hosted
    7.4Free plan
  3. 6Intuit Enterprise Suite for Nonprofits logo
    7.3From $7,800 a year
  4. 7

    Aplos

    Aplos provides fund accounting software for nonprofits and churches.

    WebAPI
    7.2From $79 a month
  5. 8

    Churchsoft Assist 2026

    Churchsoft Assist 2026 brings church membership, contributions, fund accounting, payroll, and communication tools together.

    AndroidiOSWebmacOS
    7.2From $349 a year
  6. 9

    NonProfit+

    NonProfit+ is nonprofit business management and ERP software built on the Acumatica platform.

    AndroidiOSWebAPI
    7.2From $675 a month
  7. 10NP Ledger logo

    NP Ledger

    NP Ledger is cloud-based bookkeeping software for nonprofit teams, with fund accounting and support for Form 990 preparation.

    Web
    7.1From $289 a year
  8. 11Fund EZ logo

    Fund EZ

    Fund EZ is nonprofit accounting software for organizations managing grants, restricted funds, budgets, allocations and financial reporting.

    Self-hostedWindows
    7.0
  9. 12

    Clubtreasurer

    Clubtreasurer is cloud-based accounting and membership software for clubs, charities, and volunteer-led organisations.

    WebAPI
    6.9From £7 a month
  10. 13Sevastack logo

    Sevastack

    Free planWebAPI
    6.7From ₹624 a month
  11. 14
    6.6From $50 a month
  12. 15MonkeyPod logo

    MonkeyPod

    MonkeyPod is a web-based nonprofit management system combining donor management, grant tracking, nonprofit accounting, online fundraising, and email marketing.

    Web
    6.5From $167 a month
  13. 16T3 Books logo

    T3 Books

    T3 Books is cloud-based fund accounting software for nonprofit organizations, churches, and small-to-medium organizations.

    Web
    6.5From $35 a month
  14. 17MissionLedger logo

    MissionLedger

    MissionLedger is web-based fund accounting software for nonprofits, churches, and membership associations.

    Web
    6.4From $19 a month
  15. 18

    Vestry

    Vestry is web-based fund-accounting software for churches and charities.

    Web
    6.4From C$390 a year
  16. 19Blackbaud Financial Edge NXT logo

    Blackbaud Financial Edge NXT

    Blackbaud Financial Edge NXT is a cloud-based fund accounting system designed for nonprofit organizations.

    WebAPI
    6.3
  17. 20Xledger logo

    Xledger

    Xledger is a cloud ERP for mid-market and large enterprise businesses, with accounting, multi-entity operations, and financial reporting in one system.

    AndroidiOSWebAPI
    6.2
  18. 21

    Unit4 ERP

    WebAPI
    6.1
  19. 22Denali Fund logo

    Denali Fund

    Denali Fund is fund accounting software designed for nonprofits managing federal grants, private grants, and corporate sponsorships.

    APISelf-hostedWindows
    5.9
  20. 23Sage Intacct Planning logo
    5.9
  21. 24

    CharityFinancials

    CharityFinancials is web-based accounting software for UK charities, CIOs, churches and faith organisations.

    Web
    5.8From £25 a month
  22. 25
    4.9

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